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Researching Life in the Digital Age: A Philosophical Analysis of Data-Intensive Biology

Series
Oxford Internet Institute - Lectures and Seminars
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This talk aims to provide a philosophical framework through which the current emphasis on data-intensive biology can be studied and understood.
Over the last two decades, online databases, digital visualization tools and automated data analysis have become key tools to cope with the increasing scale and diversity of scientifically relevant information that is being accumulated (the so-called ‘big data’). Within the biological and biomedical sciences, digital access to data has revolutionized research methods and ways of doing science, thus also challenging how life is researched and understood. Prominent scientists have characterized this shift as leading to a new, ‘data-intensive’ paradigm for research, encompassing innovative ways to produce, store, disseminate and interpret data. This talk aims to provide a philosophical framework through which the current emphasis on data-intensive biology, and more generally the role played by data in scientific inquiry, can be studied and understood. To achieve this, I focus on what I call data journeys: the ways in which scientific data are disseminated across a multiplicity of contexts in order to function as evidence for knowledge claims. As I will show, the more widely data are disseminated and re-used, the more significant their epistemic role is deemed to be. To be transformed into knowledge, scientific data need to be ordered, labelled and packaged to make them portable – that is, capable of being picked up and transported across different sites. In this talk, I focus on the role of online databases as key sites for data packaging, whose structure and functioning strongly affects how existing data about organisms are transformed into new claims about the biological world. Building on a close study of the material conditions under which data travel, I then put forward three main arguments: (1) portability is a defining characteristic of data as a component of scientific inquiry, which crucially depends on the specific domains through which data are made to move; (2) what counts as data in the first place depends on the procedures and contexts through which researchers attribute evidential value to objects and processes; and (3) the fruitfulness of data-intensive science can thus be understood as resulting from the skilful use of information technologies to articulate and multiply the contexts in which different types of data can be organised and interpreted.

Episode Information

Series
Oxford Internet Institute - Lectures and Seminars
People
Sabina Leonelli
Keywords
philosophy
Department: Oxford Internet Institute
Date Added: 14/05/2014
Duration: 00:39:54

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Do We Face Secular Stagnation? Panel Discussion

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Green Templeton College
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Professor Paul Krugman, Sanjaya Lall Visiting Professor, leads a panel discussion on whether the world's economy is facing 'secular stagnation' 5 years after the credit crunch.
Professor Paul Krugman, Lord Adair Turner and Lord Robert Skidelsky discuss the state of the global economy. The discussion is prompted by a talk on 'Secular Stagnation' by Professor Paul Krugman, Sanjaya Lall Visiting Professor, Trinity Term 2014, and Professor of Economics and International Affairs at the Woodrow Wilson School of Public and International Affairs at Princeton University.

Episode Information

Series
Green Templeton College
People
Paul Krugman
Lord Adair Turner
Lord Robert Skidelsky
David Watson
Tony Venables
Keywords
economics
recession
secular stagnation
credit crunch
politics
debt
Investment
Department: Green Templeton College
Date Added: 14/05/2014
Duration: 01:12:09

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Reid on the Principles of Morals

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Reid's Critique of Hume
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The final part of Professor Dan Robinson's series on Reid's critique of David Hume.
“Like all other sciences, morals must have first principles, and all moral reasoning is based on them... In all rational belief, the thing believed is either a first principle or something inferred by valid reasoning from first principles”. As for utility, “Suppose that mice rescue the distressed person by chewing through the cords that bound him. Is there moral goodness in this act of the mice?” Beyond the armchair and other precincts of untrammeled speculation, one finds that, there is little purchase on a morality of pleasure and utility. Indded, “If what we call ‘moral judgment’ isn’t really a judgment but merely a feeling, it follows that the moral principles that we have been taught to consider as an immutable law to all intelligent beings have no basis except an arbitrary structure and fabric in the constitution of the human mind…Thus, by a change in our structure immoral things could become moral…There are beings who can’t perceive mathematical truths; but no defect, no error of understanding, can make what is true to be false”.
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
principle of morals
moral judgment
causation
philosopher
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:52:34

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Hume’s “Sentimentalist” Theory of Morals

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Reid's Critique of Hume
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The seventh part of Professor Dan Robinson's series on Reid's critique of David Hume.
In his Enquiry Concerning the Principles of Morals [1751], Hume states: “The final sentence, it is probable, which pronounces characters and actions amiable or odious, praise-worthy or blameable; that which stamps on them the mark of honour or infamy, approbation or censure; that which renders morality an active principle and constitutes virtue our happiness, and vice our misery; it is probable, I say, that this final sentence depends on some internal sense or feeling, which nature has made universal in the whole species”. The ruling motives are shaped by considerations of utility. “The rage and violence of public war; what is it but a suspension of justice among the warring parties, who perceive, that this virtue is now no longer of any USE or advantage to them? The laws of war, which then succeed to those of equity and justice, are rules calculated for the ADVANTAGE and UTILITY…”
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
sentimentalism
principle of morals
causation
reid
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:50:22

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Reid on Personal Identity

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Reid's Critique of Hume
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The sixth part of Professor Dan Robinson's series on Reid's critique of David Hume.
In the third of his Essays on The Intellectual Powers of Man, Reid devotes the fourth chapter to the concept of 'identity', and the sixth chapter to Locke's theory of 'personal identity'. This latter chapter is widely regarded as a definitive refutation of the thesis that personal identity is no more than memories of a certain sort, less a “bundle of perceptions”. As he says, “This conviction of one’s own identity is utterly necessary for all exercise of reason. The operations of reason—whether practical reasoning about what to do or speculative reasoning in the building up of a theory—are made up of successive parts. In any reasoning that I perform, the early parts are the foundation of the later ones, and if I didn’t have the conviction that the early parts are propositions that I have approved or written down, I would have no reason to proceed to the later parts in any theoretical or practical project whatever”.
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
identity
philosopher
causation
active powers
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:49:08

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Hume on Personal Identity

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Reid's Critique of Hume
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The fifth part of Professor Dan Robinson's series on Reid's critique of David Hume.
“There are some philosophers who imagine we are every moment intimately conscious of what we call our self; that we feel its existence and its continuance in existence; and are certain, beyond the evidence of a demonstration, both of its perfect identity and simplicity…For my part, when I enter most intimately into what I call myself, I always stumble on some particular perception or other, of heat or cold, light or shade, love or hatred, pain or pleasure. I never can catch myself at any time without a perception, and never can observe any thing but the perception. When my perceptions are removed for any time, as by sound sleep, so long am I insensible of myself, and may truly be said not to exist. And were all my perceptions removed by death, and could I neither think, nor feel, nor see, nor love, nor hate, after the dissolution of my body, I should be entirely annihilated...”
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
personal identity
consciousness
causation
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:41:40

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Reid on Causation and Active Powers

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Reid's Critique of Hume
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The fourth part of Professor Dan Robinson's series examining Reid's critique of David Hume.
“It is evident that a power is a quality, and therefore can’t exist without a subject to which it belongs…This (Humean) suggestion— There exists some power that cannot be attributed to any thing, any subject, which has the power —is an absurdity…No principle seems to have been more universally acknowledged by mankind ever since the first dawn of reason than that every change we observe in nature must have a cause…Another argument to show that all men have a notion or idea of active power is that there are many mental operations—performed by everyone who has a mind, and necessary in the ordinary conduct of life—which presuppose that we have active power”.
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
active power
causation
impressions
common sense
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:45:41

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Hume on Causation

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Reid's Critique of Hume
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The third part of Professor Dan Robinson's series examining Reid's critique of David Hume.
Causality arises from a habit of the mind formed by repeated experiences. “There is nothing in any objects to persuade us, that they are either always remote or always contiguous; and when from experience and observation we discover, that their relation in this particular is invariable, we, always conclude there is some secret cause, which separates or unites them…”
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
causation theory
contiguous
Thomas Reid
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:49:48

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Reid and Common Sense Realism

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Reid's Critique of Hume
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Part two of Professor Dan Robinson's examination of Reid's critique of David Hume.
Is it the case that every simple idea is a “copy” of a simple impression? Hume is but the latest to deny that we have direct access to the external world. The “ideal” theory, relegating ideas to a mental realm whose occupants are but “copies” of some indefinite thing, is the sure path to skepticism and is at variance with the proper methods of science.
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Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
realism
common sense
impression
theory
perception
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 00:52:20

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The “representational” theory of knowledge

Series
Reid's Critique of Hume
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Professor Dan Robinson, Oxford University, delivers the first part of his series examining Reid's Critique of Hume.
Hume defends the thesis according to which “ALL THE PERCEPTIONS OF THE HUMAN MIND RESOLVE THEMSELVES INTO…IMPRESSIONS AND IDEAS”. Accordingly, “We may prosecute this enquiry to what length we please; where we shall always find, that every idea which we examine is copied from a similar impression”.
Creative Commons Licence
Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK (BY-NC-SA): England & Wales; https://creativecommons.org/licenses/by-nc-sa/2.0/uk/

Episode Information

Series
Reid's Critique of Hume
People
Dan Robinson
Keywords
hume
causation
impressions
realism
active powers
Department: Faculty of Philosophy
Date Added: 14/05/2014
Duration: 01:00:19

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